STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SO_4640Antioxidant AhpC/Tsa family; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. (158 aa)    
Predicted Functional Partners:
SO_3349
Periplasmic glutathione peroxidase; Belongs to the glutathione peroxidase family.
   
 0.930
SO_1563
Cytoplasmic glutathione peroxidase.
   
 0.928
gor
Glutathione-disulfide reductase Gor.
    
 0.920
gst-2
Glutathione S-transferase Gst.
  
 
 0.917
ggtA
Gamma-glutamyltransferase GgtA.
   
 
 0.906
SO_0746
Glutathione S-transferase family protein.
   
 
 0.904
gshB
ATP-dependent glutathione synthetase GshB.
   
 
 0.903
SO_0012
Glutathione S-transferase family protein.
   
 
 0.902
ggtB
Gamma-glutamyltransferase GgtB.
     
 0.901
ahpC
Alkyl hydroperoxide reductase peroxiredoxin component AhpC; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
   
 0.706
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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