Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SO_4650Alpha/beta hydrolase family of unknown function DUF1234. (210 aa)    
Predicted Functional Partners:
SO_4651
Protein of unknown function DUF2292.
  
    0.590
sbp
ABC-type sulfate/thiosulfate uptakesystem substrate-binding subunit Sbp.
  
    0.582
SO_3900
Enzyme of unknown function UPF0227.
  
   
 0.425
SO_2620
Transport protein AEC family.
   
    0.421
dnrN
Repair of iron centers (RIC) protein DnrN; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.
   
    0.413
SO_4360
Periplasmic decaheme cytochrome c MtrA family.
   
    0.413
cysT-2
ABC-type sulfate/thiosulfate uptakesystem permease component 1 CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
    0.403
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.