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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SO_4717Tungstate-responsive two component signal transduction system histidine kinase. (709 aa)    
Predicted Functional Partners:
SO_4718
Tungstate-responsive two component Sigma54-dependent signal transduction system response regulator Fis family.
 
 0.938
SO_4716
Acteyltransferase GNAT family.
      
 0.782
SO_4502
Molydopterin cofactor biosynthesis protein.
  
     0.752
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase MtgA; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
      
 0.732
fdhT
Formate dehydrogenase chaperone FdhT.
  
    0.679
SO_4506
Iron-sulfur cluster-binding protein.
 
    0.671
fdhD-2
Formate dehydrogenase assembly/maturation protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
  
     0.662
tupA
ABC-type tungstate uptake system substrate-binding component TupA.
 
    0.646
fdhC
Formate dehydrogenase cytochrome b subunit FdhC.
  
     0.645
tupB
ABC-type tungstate uptake system permease component TupB.
 
    0.636
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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