STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
ccoGCbb3-type cytochrome oxidase assembly protein CcoG. (475 aa)    
Predicted Functional Partners:
ccoP
Cbb3-type cytochrome c oxidase subunit III CcoP; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
  
 0.986
ccoO
Cbb3-type cytochrome c oxidase subunit II CcoO.
 
  
 0.980
ccoN
Cbb3-type cytochrome c oxidase subunit I CcoN; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.972
ccoS
Cbb3-type cytochrome oxidase assembly protein CcoS.
 
  
 0.946
ccoQ
Cbb3-type cytochrome c oxidase subunit IV CcoQ.
 
  
 0.858
SO_2357
Cbb3-type cytochrome oxidase assembly protein disulfide bond oxidoreductase DsbD family.
 
     0.783
ccoH
Cbb3-type cytochrome oxidase assembly protein CcoH.
 
    0.769
ccoI
Cbb3-type cytochrome oxidase-associated copper translocating P-ATPase CcoI.
 
  
 0.737
hemN
Coproporphyrinogen III oxidase oxygen-independent HemN; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
  
 0.692
cydC
ABC-type cysteine/glutathione export system bifunctional ATPase and permease component CydC.
     
 0.673
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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