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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glmRGlucosamine-6-phosphate sensitive transcriptional repressor of lipopolysaccharide biosyntheis GlmR. (256 aa)    
Predicted Functional Partners:
SO_2796
Protein of unknown function DUF748.
  
  
 0.743
glmS
Glutamine:fructose-6-phosphate transaminase (isomerizing) GlmS; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
  
 0.668
malR
Transcriptional repressor of maltodextrose utilization MalR.
  
   
 0.645
glpD
Aerobic glycerol-3-phosphate dehydrogenase GlpD.
 
  
 0.631
fabG
3-oxoacyl-(acyl-carrier-protein) reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.624
zntR
Zinc and cadmium (II) responsive transcriptional activator ZntR.
      
 0.586
sdaR
Transcriptional repressor of glycerate utilization SdaR.
      
 0.580
nrdR
Transcriptional repressor of deoxyribonucleotide biosynthesis NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.
     
 0.573
hutC
Transcriptional repressor of histidine utilization genes HutC.
      
 0.571
ptsN
Phosphotransferase system (PTS) sugar-specific IIA component PtsN.
 
  
 0.569
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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