Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
wbnJO-antigen biosynthesis acetyltransferase WbnJ. (177 aa)    
Predicted Functional Partners:
SO_3183
Perosamine synthetase-related protein; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.948
cysK
Cysteine synthase CysK; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 
 0.936
wbpQ
Asparagine synthase glutamine-hydrolyzing WbpQ.
     
 0.930
cysM
Cysteine synthase B CysM; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 
 0.916
cysS
cysteinyl-tRNA synthetase CysS; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 0.846
wzx
O-antigen flippase Wzx.
  
  
 0.832
SO_4685
Outer membrane protein in capsule/EPS biosynthesis locus.
      
 0.809
wbnI
Glycosyl transferase family 2 WbnI.
  
  
 0.803
wzy
O-antigen polymerase Wzy.
       0.773
SO_3185
Enzyme for biosynthesis of dTDP-Qui4N; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 0.752
Your Current Organism:
Shewanella oneidensis
NCBI taxonomy Id: 211586
Other names: S. oneidensis MR-1, Shewanella oneidensis ATCC 700550, Shewanella oneidensis MR-1, Shewanella oneidensis str. MR-1, Shewanella oneidensis strain MR-1, Shewanella sp. MR-1
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