Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHFPL3LHFPL tetraspan subfamily member 3. (239 aa)    
Predicted Functional Partners:
ENSANIP00000008229
annotation not available
 
     0.930
PCDH15
Protocadherin related 15.
    
 0.793
ENSANIP00000008834
annotation not available
    
 0.793
GGT7
Gamma-glutamyltransferase 7.
   
   0.680
TMC3
Transmembrane channel like 3.
   
 0.616
TMC1
Transmembrane channel like 1.
   
 0.616
ENSANIP00000009003
annotation not available
     
 0.597
CIB3
Calcium and integrin binding family member 3.
     
 0.597
EWSR1
EWS RNA binding protein 1.
      
 0.541
CIB2
Calcium and integrin binding family member 2.
     
 0.534
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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