ENSANIP00000001196 protein (Accipiter nisus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ENSANIP00000001196

annotation not available (228 aa)

Predicted Functional Partners:

ENSANIP00000020371

0.608

SRF

0.569

WDR90

0.499

ENSANIP00000012759

0.496

LDB1

0.494

ENSANIP00000007191

0.494

LEMD3

0.487

ENSANIP00000004709

0.472

HAND2

0.472

ENSANIP00000023617

0.472

Your Current Organism:

Accipiter nisus

NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSANIP00000001196	ENSANIP00000004709	ENSANIP00000001196	ENSANIP00000004709	annotation not available	annotation not available	0.472
ENSANIP00000001196	ENSANIP00000007191	ENSANIP00000001196	ENSANIP00000007191	annotation not available	annotation not available	0.494
ENSANIP00000001196	ENSANIP00000012759	ENSANIP00000001196	ENSANIP00000012759	annotation not available	annotation not available	0.496
ENSANIP00000001196	ENSANIP00000020371	ENSANIP00000001196	ENSANIP00000020371	annotation not available	annotation not available	0.608
ENSANIP00000001196	ENSANIP00000023617	ENSANIP00000001196	ENSANIP00000023617	annotation not available	annotation not available	0.472
ENSANIP00000001196	HAND2	ENSANIP00000001196	ENSANIP00000009023	annotation not available	Heart and neural crest derivatives expressed 2.	0.472
ENSANIP00000001196	LDB1	ENSANIP00000001196	ENSANIP00000006649	annotation not available	LIM domain binding 1.	0.494
ENSANIP00000001196	LEMD3	ENSANIP00000001196	ENSANIP00000004878	annotation not available	LEM domain containing 3.	0.487
ENSANIP00000001196	SRF	ENSANIP00000001196	ENSANIP00000026383	annotation not available	Serum response factor.	0.569
ENSANIP00000001196	WDR90	ENSANIP00000001196	ENSANIP00000004585	annotation not available	WD repeat domain 90.	0.499
ENSANIP00000004709	ENSANIP00000001196	ENSANIP00000004709	ENSANIP00000001196	annotation not available	annotation not available	0.472
ENSANIP00000004709	ENSANIP00000023617	ENSANIP00000004709	ENSANIP00000023617	annotation not available	annotation not available	0.952
ENSANIP00000007191	ENSANIP00000001196	ENSANIP00000007191	ENSANIP00000001196	annotation not available	annotation not available	0.494
ENSANIP00000007191	HAND2	ENSANIP00000007191	ENSANIP00000009023	annotation not available	Heart and neural crest derivatives expressed 2.	0.497
ENSANIP00000012759	ENSANIP00000001196	ENSANIP00000012759	ENSANIP00000001196	annotation not available	annotation not available	0.496
ENSANIP00000020371	ENSANIP00000001196	ENSANIP00000020371	ENSANIP00000001196	annotation not available	annotation not available	0.608
ENSANIP00000020371	WDR90	ENSANIP00000020371	ENSANIP00000004585	annotation not available	WD repeat domain 90.	0.956
ENSANIP00000023617	ENSANIP00000001196	ENSANIP00000023617	ENSANIP00000001196	annotation not available	annotation not available	0.472
ENSANIP00000023617	ENSANIP00000004709	ENSANIP00000023617	ENSANIP00000004709	annotation not available	annotation not available	0.952
HAND2	ENSANIP00000001196	ENSANIP00000009023	ENSANIP00000001196	Heart and neural crest derivatives expressed 2.	annotation not available	0.472