STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL54Mitochondrial ribosomal protein L54. (138 aa)    
Predicted Functional Partners:
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.978
ENSANIP00000002794
annotation not available
   
 
 0.963
MRPL17
Mitochondrial ribosomal protein L17.
   
 
 0.958
MRPL41
Mitochondrial ribosomal protein L41.
   
 
 0.941
MRPS16
Mitochondrial ribosomal protein S16.
   
   0.933
MRPL49
Mitochondrial ribosomal protein L49.
   
 
 0.929
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.927
ENSANIP00000001089
annotation not available
   
 
 0.926
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.919
MRPS25
Mitochondrial ribosomal protein S25.
   
 
 0.915
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.