Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COP1COP1 E3 ubiquitin ligase. (754 aa)    
Predicted Functional Partners:
ENSANIP00000021270
annotation not available
    
 0.997
ENSANIP00000005645
annotation not available
    
 0.996
DDB1
Damage specific DNA binding protein 1.
    
 0.994
ETV1
ETS variant transcription factor 1.
    
 
 0.980
STK40
Serine/threonine kinase 40.
    
 
 0.979
ETV5
ETS variant transcription factor 5.
    
 
 0.979
RBX1
Ring-box 1.
    
 0.975
DDB2
Damage specific DNA binding protein 2.
    
 0.968
CUL4A
Cullin 4A.
    
 0.944
CUL4B
Cullin 4B.
    
 0.944
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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