STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KDM2ALysine demethylase 2A. (1170 aa)    
Predicted Functional Partners:
SKP1
S-phase kinase associated protein 1.
    
 0.979
PCGF1
Polycomb group ring finger 1.
   
 0.943
KDM2B
Lysine demethylase 2B.
    
 0.929
RNF2
Ring finger protein 2.
    
 
 0.911
RING1
Ring finger protein 1.
    
 
 0.911
CUL1
Cullin 1.
    
 0.905
BCOR
BCL6 corepressor.
    
 0.905
CUL3
Cullin 3.
    
 0.904
CACUL1
CDK2 associated cullin domain 1.
    
 0.904
YAF2
YY1 associated factor 2.
    
 
 0.902
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.