Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NOP56NOP56 ribonucleoprotein. (495 aa)    
Predicted Functional Partners:
SNU13
Small nuclear ribonucleoprotein 13.
   
 0.999
NOP58
NOP58 ribonucleoprotein.
  
0.999
NOLC1
Nucleolar and coiled-body phosphoprotein 1.
   
 
 0.998
UTP15
UTP15 small subunit processome component.
   
 0.998
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 0.998
DKC1
Dyskerin pseudouridine synthase 1.
   
 0.998
WDR43
WD repeat domain 43.
   
 0.996
RPP38
Ribonuclease P/MRP subunit p38.
   
 0.996
UTP4
UTP4 small subunit processome component.
   
 0.996
NHP2
NHP2 ribonucleoprotein.
   
 0.996
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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