ENSANIP00000001459 protein (Accipiter nisus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSANIP00000001459

annotation not available (261 aa)

Predicted Functional Partners:

ENSANIP00000012479

0.899

ENSANIP00000012016

0.875

ENSANIP00000005704

0.808

CLPP

0.637

CLPX

0.592

MSX1

0.538

MEOX2

0.505

CETP

0.478

RGS9BP

0.466

SHOX

0.463

Your Current Organism:

Accipiter nisus

NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CETP	ENSANIP00000001459	ENSANIP00000024328	ENSANIP00000001459	Cholesteryl ester transfer protein.	annotation not available	0.478
CETP	ENSANIP00000012479	ENSANIP00000024328	ENSANIP00000012479	Cholesteryl ester transfer protein.	annotation not available	0.478
CLPP	CLPX	ENSANIP00000017104	ENSANIP00000010663	Caseinolytic mitochondrial matrix peptidase proteolytic subunit.	Caseinolytic mitochondrial matrix peptidase chaperone subunit.	0.999
CLPP	ENSANIP00000001459	ENSANIP00000017104	ENSANIP00000001459	Caseinolytic mitochondrial matrix peptidase proteolytic subunit.	annotation not available	0.637
CLPP	ENSANIP00000012479	ENSANIP00000017104	ENSANIP00000012479	Caseinolytic mitochondrial matrix peptidase proteolytic subunit.	annotation not available	0.637
CLPX	CLPP	ENSANIP00000010663	ENSANIP00000017104	Caseinolytic mitochondrial matrix peptidase chaperone subunit.	Caseinolytic mitochondrial matrix peptidase proteolytic subunit.	0.999
CLPX	ENSANIP00000001459	ENSANIP00000010663	ENSANIP00000001459	Caseinolytic mitochondrial matrix peptidase chaperone subunit.	annotation not available	0.592
CLPX	ENSANIP00000012479	ENSANIP00000010663	ENSANIP00000012479	Caseinolytic mitochondrial matrix peptidase chaperone subunit.	annotation not available	0.592
ENSANIP00000001459	CETP	ENSANIP00000001459	ENSANIP00000024328	annotation not available	Cholesteryl ester transfer protein.	0.478
ENSANIP00000001459	CLPP	ENSANIP00000001459	ENSANIP00000017104	annotation not available	Caseinolytic mitochondrial matrix peptidase proteolytic subunit.	0.637
ENSANIP00000001459	CLPX	ENSANIP00000001459	ENSANIP00000010663	annotation not available	Caseinolytic mitochondrial matrix peptidase chaperone subunit.	0.592
ENSANIP00000001459	ENSANIP00000005704	ENSANIP00000001459	ENSANIP00000005704	annotation not available	annotation not available	0.808
ENSANIP00000001459	ENSANIP00000012016	ENSANIP00000001459	ENSANIP00000012016	annotation not available	annotation not available	0.875
ENSANIP00000001459	ENSANIP00000012479	ENSANIP00000001459	ENSANIP00000012479	annotation not available	annotation not available	0.899
ENSANIP00000001459	MEOX2	ENSANIP00000001459	ENSANIP00000012740	annotation not available	Mesenchyme homeobox 2.	0.505
ENSANIP00000001459	MSX1	ENSANIP00000001459	ENSANIP00000001873	annotation not available	Msh homeobox 1.	0.538
ENSANIP00000001459	RGS9BP	ENSANIP00000001459	ENSANIP00000000304	annotation not available	Regulator of G protein signaling 9 binding protein.	0.466
ENSANIP00000001459	SHOX	ENSANIP00000001459	ENSANIP00000006036	annotation not available	Short stature homeobox.	0.463
ENSANIP00000005704	ENSANIP00000001459	ENSANIP00000005704	ENSANIP00000001459	annotation not available	annotation not available	0.808
ENSANIP00000012016	ENSANIP00000001459	ENSANIP00000012016	ENSANIP00000001459	annotation not available	annotation not available	0.875