STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHMP1BCharged multivesicular body protein 1B. (218 aa)    
Predicted Functional Partners:
CHMP2B
Charged multivesicular body protein 2B.
   
 0.995
ENSANIP00000006706
annotation not available
 
 
 0.994
CHMP5
Charged multivesicular body protein 5.
   
 0.994
ENSANIP00000016459
annotation not available
   
 0.994
VTA1
Vesicle trafficking 1.
   
 0.993
CHMP4B
Charged multivesicular body protein 4B.
   
 0.987
CHMP4C
Charged multivesicular body protein 4C.
   
 0.987
CHMP6
Charged multivesicular body protein 6.
   
 0.986
VPS4B
Vacuolar protein sorting 4 homolog B.
   
 0.972
ENSANIP00000026253
annotation not available
   
 0.972
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.