STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX22Sorting nexin 22. (224 aa)    
Predicted Functional Partners:
SPATA46
Spermatogenesis associated 46.
    
   0.850
GAPVD1
GTPase activating protein and VPS9 domains 1.
    
 
 0.692
SNX10
Sorting nexin 10.
     
 0.683
NUDT17
Nudix hydrolase 17.
      
 0.648
FNBP1
Formin binding protein 1.
    
 
 0.645
FGFR1
Fibroblast growth factor receptor 1.
    
   0.644
FGFR2
Fibroblast growth factor receptor 2.
    
   0.644
ENSANIP00000024450
annotation not available
    
   0.644
RAB7B
RAB7B, member RAS oncogene family.
     
 0.625
GULP1
GULP PTB domain containing engulfment adaptor 1.
      
 0.602
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.