STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPM1LProtein phosphatase, Mg2+/Mn2+ dependent 1L. (266 aa)    
Predicted Functional Partners:
DBT
Dihydrolipoamide branched chain transacylase E2.
   
 0.869
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
   
 0.865
ENSANIP00000020371
annotation not available
   
 0.811
VAPA
VAMP associated protein A.
    
 0.787
LRRC34
Leucine rich repeat containing 34.
   
 0.784
ENSANIP00000014270
annotation not available
   
 0.737
ENSANIP00000014831
annotation not available
   
 0.737
AANAT
Aralkylamine N-acetyltransferase.
    
   0.719
VAPB
VAMP associated protein B and C.
    
 0.716
WDR90
WD repeat domain 90.
    
   0.708
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.