Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNU13Small nuclear ribonucleoprotein 13. (128 aa)    
Predicted Functional Partners:
NOP56
NOP56 ribonucleoprotein.
   
 0.999
NOP58
NOP58 ribonucleoprotein.
   
 0.999
UTP15
UTP15 small subunit processome component.
   
 0.998
PRPF31
pre-mRNA processing factor 31.
    
 0.998
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
 0.997
PRPF3
pre-mRNA processing factor 3.
    
 0.994
PPIH
Peptidylprolyl isomerase H.
  
 0.994
PRPF4
pre-mRNA processing factor 4.
   
 0.992
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.989
RPS6
Ribosomal protein S6.
  
 0.986
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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