FERMT2 protein (Accipiter nisus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

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experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

FERMT2

Fermitin family member 2. (652 aa)

Predicted Functional Partners:

FBLIM1

0.976

ILK

0.943

ENSANIP00000005809

0.813

LPP

0.803

VCL

0.783

ENSANIP00000002108

0.755

LIMS2

0.755

ITGB8

0.746

ENSANIP00000006841

0.746

PARVA

0.743

Your Current Organism:

Accipiter nisus

NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSANIP00000002108	FERMT2	ENSANIP00000002108	ENSANIP00000001663	annotation not available	Fermitin family member 2.	0.755
ENSANIP00000002108	ILK	ENSANIP00000002108	ENSANIP00000020276	annotation not available	Integrin linked kinase.	0.979
ENSANIP00000002108	PARVA	ENSANIP00000002108	ENSANIP00000007637	annotation not available	Parvin alpha.	0.942
ENSANIP00000002108	VCL	ENSANIP00000002108	ENSANIP00000018641	annotation not available	Vinculin.	0.552
ENSANIP00000005809	ENSANIP00000006841	ENSANIP00000005809	ENSANIP00000006841	annotation not available	annotation not available	0.905
ENSANIP00000005809	FERMT2	ENSANIP00000005809	ENSANIP00000001663	annotation not available	Fermitin family member 2.	0.813
ENSANIP00000005809	ILK	ENSANIP00000005809	ENSANIP00000020276	annotation not available	Integrin linked kinase.	0.914
ENSANIP00000005809	ITGB8	ENSANIP00000005809	ENSANIP00000006605	annotation not available	Integrin subunit beta 8.	0.899
ENSANIP00000005809	PARVA	ENSANIP00000005809	ENSANIP00000007637	annotation not available	Parvin alpha.	0.932
ENSANIP00000005809	VCL	ENSANIP00000005809	ENSANIP00000018641	annotation not available	Vinculin.	0.862
ENSANIP00000006841	ENSANIP00000005809	ENSANIP00000006841	ENSANIP00000005809	annotation not available	annotation not available	0.905
ENSANIP00000006841	FERMT2	ENSANIP00000006841	ENSANIP00000001663	annotation not available	Fermitin family member 2.	0.746
ENSANIP00000006841	ILK	ENSANIP00000006841	ENSANIP00000020276	annotation not available	Integrin linked kinase.	0.776
ENSANIP00000006841	ITGB8	ENSANIP00000006841	ENSANIP00000006605	annotation not available	Integrin subunit beta 8.	0.865
ENSANIP00000006841	PARVA	ENSANIP00000006841	ENSANIP00000007637	annotation not available	Parvin alpha.	0.868
ENSANIP00000006841	VCL	ENSANIP00000006841	ENSANIP00000018641	annotation not available	Vinculin.	0.576
FBLIM1	FERMT2	ENSANIP00000023015	ENSANIP00000001663	Filamin binding LIM protein 1.	Fermitin family member 2.	0.976
FERMT2	ENSANIP00000002108	ENSANIP00000001663	ENSANIP00000002108	Fermitin family member 2.	annotation not available	0.755
FERMT2	ENSANIP00000005809	ENSANIP00000001663	ENSANIP00000005809	Fermitin family member 2.	annotation not available	0.813
FERMT2	ENSANIP00000006841	ENSANIP00000001663	ENSANIP00000006841	Fermitin family member 2.	annotation not available	0.746