STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OTUD6BOTU deubiquitinase 6B. (302 aa)    
Predicted Functional Partners:
OTUB1
OTU deubiquitinase, ubiquitin aldehyde binding 1.
    
 
 0.914
RPS8
Ribosomal protein S8.
   
 
 0.813
USP10
Ubiquitin specific peptidase 10.
   
 
 0.770
RPS15
Ribosomal protein S15.
   
   0.746
RPS7
Ribosomal protein S7.
    
 
 0.744
RPS11
Ribosomal protein S11.
    
   0.675
RPS18
Ribosomal protein S18.
    
   0.675
GPR87
G protein-coupled receptor 87.
    
 
 0.665
USP45
Ubiquitin specific peptidase 45.
      
 0.660
RPS13
Ribosomal protein S13.
   
   0.652
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.