TAGLN protein (Accipiter nisus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

TAGLN

Transgelin. (399 aa)

Predicted Functional Partners:

WDR90

0.837

ENSANIP00000020371

0.820

AK9

0.724

ENKUR

0.684

VCL

0.674

ENSANIP00000021036

0.612

ACTL10

0.610

ACTC1

0.610

ENSANIP00000010912

0.610

ENSANIP00000011427

0.610

Your Current Organism:

Accipiter nisus

NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTC1	ENKUR	ENSANIP00000007647	ENSANIP00000018652	Actin alpha cardiac muscle 1.	Enkurin, TRPC channel interacting protein.	0.427
ACTC1	ENSANIP00000010912	ENSANIP00000007647	ENSANIP00000010912	Actin alpha cardiac muscle 1.	annotation not available	0.609
ACTC1	ENSANIP00000011427	ENSANIP00000007647	ENSANIP00000011427	Actin alpha cardiac muscle 1.	annotation not available	0.609
ACTC1	ENSANIP00000020371	ENSANIP00000007647	ENSANIP00000020371	Actin alpha cardiac muscle 1.	annotation not available	0.672
ACTC1	ENSANIP00000021036	ENSANIP00000007647	ENSANIP00000021036	Actin alpha cardiac muscle 1.	annotation not available	0.434
ACTC1	TAGLN	ENSANIP00000007647	ENSANIP00000001689	Actin alpha cardiac muscle 1.	Transgelin.	0.610
ACTC1	VCL	ENSANIP00000007647	ENSANIP00000018641	Actin alpha cardiac muscle 1.	Vinculin.	0.857
ACTC1	WDR90	ENSANIP00000007647	ENSANIP00000004585	Actin alpha cardiac muscle 1.	WD repeat domain 90.	0.630
ACTL10	ENKUR	ENSANIP00000003101	ENSANIP00000018652	Actin like 10.	Enkurin, TRPC channel interacting protein.	0.427
ACTL10	ENSANIP00000020371	ENSANIP00000003101	ENSANIP00000020371	Actin like 10.	annotation not available	0.672
ACTL10	ENSANIP00000021036	ENSANIP00000003101	ENSANIP00000021036	Actin like 10.	annotation not available	0.434
ACTL10	TAGLN	ENSANIP00000003101	ENSANIP00000001689	Actin like 10.	Transgelin.	0.610
ACTL10	VCL	ENSANIP00000003101	ENSANIP00000018641	Actin like 10.	Vinculin.	0.857
ACTL10	WDR90	ENSANIP00000003101	ENSANIP00000004585	Actin like 10.	WD repeat domain 90.	0.630
AK9	ENKUR	ENSANIP00000007892	ENSANIP00000018652	Adenylate kinase 9.	Enkurin, TRPC channel interacting protein.	0.432
AK9	ENSANIP00000020371	ENSANIP00000007892	ENSANIP00000020371	Adenylate kinase 9.	annotation not available	0.966
AK9	ENSANIP00000021036	ENSANIP00000007892	ENSANIP00000021036	Adenylate kinase 9.	annotation not available	0.749
AK9	TAGLN	ENSANIP00000007892	ENSANIP00000001689	Adenylate kinase 9.	Transgelin.	0.724
AK9	WDR90	ENSANIP00000007892	ENSANIP00000004585	Adenylate kinase 9.	WD repeat domain 90.	0.763
ENKUR	ACTC1	ENSANIP00000018652	ENSANIP00000007647	Enkurin, TRPC channel interacting protein.	Actin alpha cardiac muscle 1.	0.427