MRPS35 protein (Accipiter nisus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

MRPS35

Mitochondrial ribosomal protein S35. (341 aa)

Predicted Functional Partners:

MRPS23

0.999

MRPS10

0.999

MRPS22

0.999

MRPS15

0.999

MRPS11

0.999

DAP3

0.999

ENSANIP00000013541

0.999

ENSANIP00000013794

0.999

MRPS2

0.999

MRPS14

0.999

Your Current Organism:

Accipiter nisus

NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DAP3	ENSANIP00000013541	ENSANIP00000012727	ENSANIP00000013541	Death associated protein 3.	annotation not available	0.999
DAP3	ENSANIP00000013794	ENSANIP00000012727	ENSANIP00000013794	Death associated protein 3.	annotation not available	0.999
DAP3	MRPS10	ENSANIP00000012727	ENSANIP00000005161	Death associated protein 3.	Mitochondrial ribosomal protein S10.	0.999
DAP3	MRPS11	ENSANIP00000012727	ENSANIP00000008425	Death associated protein 3.	Mitochondrial ribosomal protein S11.	0.999
DAP3	MRPS14	ENSANIP00000012727	ENSANIP00000026519	Death associated protein 3.	Mitochondrial ribosomal protein S14.	0.998
DAP3	MRPS15	ENSANIP00000012727	ENSANIP00000007927	Death associated protein 3.	Mitochondrial ribosomal protein S15.	0.998
DAP3	MRPS2	ENSANIP00000012727	ENSANIP00000021755	Death associated protein 3.	Mitochondrial ribosomal protein S2.	0.999
DAP3	MRPS22	ENSANIP00000012727	ENSANIP00000007286	Death associated protein 3.	Mitochondrial ribosomal protein S22.	0.999
DAP3	MRPS23	ENSANIP00000012727	ENSANIP00000001905	Death associated protein 3.	Mitochondrial ribosomal protein S23.	0.998
DAP3	MRPS35	ENSANIP00000012727	ENSANIP00000001749	Death associated protein 3.	Mitochondrial ribosomal protein S35.	0.999
ENSANIP00000013541	DAP3	ENSANIP00000013541	ENSANIP00000012727	annotation not available	Death associated protein 3.	0.999
ENSANIP00000013541	ENSANIP00000013794	ENSANIP00000013541	ENSANIP00000013794	annotation not available	annotation not available	0.999
ENSANIP00000013541	MRPS10	ENSANIP00000013541	ENSANIP00000005161	annotation not available	Mitochondrial ribosomal protein S10.	0.999
ENSANIP00000013541	MRPS11	ENSANIP00000013541	ENSANIP00000008425	annotation not available	Mitochondrial ribosomal protein S11.	0.999
ENSANIP00000013541	MRPS14	ENSANIP00000013541	ENSANIP00000026519	annotation not available	Mitochondrial ribosomal protein S14.	0.999
ENSANIP00000013541	MRPS15	ENSANIP00000013541	ENSANIP00000007927	annotation not available	Mitochondrial ribosomal protein S15.	0.999
ENSANIP00000013541	MRPS2	ENSANIP00000013541	ENSANIP00000021755	annotation not available	Mitochondrial ribosomal protein S2.	0.999
ENSANIP00000013541	MRPS22	ENSANIP00000013541	ENSANIP00000007286	annotation not available	Mitochondrial ribosomal protein S22.	0.999
ENSANIP00000013541	MRPS23	ENSANIP00000013541	ENSANIP00000001905	annotation not available	Mitochondrial ribosomal protein S23.	0.999
ENSANIP00000013541	MRPS35	ENSANIP00000013541	ENSANIP00000001749	annotation not available	Mitochondrial ribosomal protein S35.	0.999