STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB7BRAB7B, member RAS oncogene family. (261 aa)    
Predicted Functional Partners:
GDI2
GDP dissociation inhibitor 2.
    
 0.948
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
    
 
 0.906
VPS11
VPS11 core subunit of CORVET and HOPS complexes.
    
 
 0.905
ENSANIP00000002866
annotation not available
    
 0.905
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
    
 
 0.905
ENSANIP00000020081
annotation not available
   
 0.892
RILP
Rab interacting lysosomal protein.
    
 0.878
ENSANIP00000008382
annotation not available
   
 0.859
RAB7A
RAB7A, member RAS oncogene family.
  
 
0.852
FYCO1
FYVE and coiled-coil domain containing 1.
     
 0.843
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.