LRTM1 protein (Accipiter nisus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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co-expression

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[Homology]

Score

LRTM1

Leucine rich repeats and transmembrane domains 1. (345 aa)

Predicted Functional Partners:

ENSANIP00000003217

0.699

NTNG1

0.609

ENSANIP00000022100

0.595

ENSANIP00000015556

0.568

ENSANIP00000021769

0.568

MET

0.561

MST1R

0.561

TONSL

0.560

KIAA0586

0.512

TMEM220

0.504

Your Current Organism:

Accipiter nisus

NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSANIP00000003217	LRTM1	ENSANIP00000003217	ENSANIP00000001993	annotation not available	Leucine rich repeats and transmembrane domains 1.	0.699
ENSANIP00000003217	MET	ENSANIP00000003217	ENSANIP00000009665	annotation not available	MET proto-oncogene, receptor tyrosine kinase.	0.679
ENSANIP00000003217	MST1R	ENSANIP00000003217	ENSANIP00000018919	annotation not available	Macrophage stimulating 1 receptor.	0.679
ENSANIP00000003217	NTNG1	ENSANIP00000003217	ENSANIP00000018355	annotation not available	Netrin G1.	0.448
ENSANIP00000003217	TONSL	ENSANIP00000003217	ENSANIP00000005143	annotation not available	Tonsoku like, DNA repair protein.	0.548
ENSANIP00000015556	ENSANIP00000021769	ENSANIP00000015556	ENSANIP00000021769	annotation not available	annotation not available	0.998
ENSANIP00000015556	LRTM1	ENSANIP00000015556	ENSANIP00000001993	annotation not available	Leucine rich repeats and transmembrane domains 1.	0.568
ENSANIP00000021769	ENSANIP00000015556	ENSANIP00000021769	ENSANIP00000015556	annotation not available	annotation not available	0.998
ENSANIP00000021769	LRTM1	ENSANIP00000021769	ENSANIP00000001993	annotation not available	Leucine rich repeats and transmembrane domains 1.	0.568
ENSANIP00000022100	LRTM1	ENSANIP00000022100	ENSANIP00000001993	annotation not available	Leucine rich repeats and transmembrane domains 1.	0.595
KIAA0586	LRTM1	ENSANIP00000001544	ENSANIP00000001993	KIAA0586.	Leucine rich repeats and transmembrane domains 1.	0.512
LRTM1	ENSANIP00000003217	ENSANIP00000001993	ENSANIP00000003217	Leucine rich repeats and transmembrane domains 1.	annotation not available	0.699
LRTM1	ENSANIP00000015556	ENSANIP00000001993	ENSANIP00000015556	Leucine rich repeats and transmembrane domains 1.	annotation not available	0.568
LRTM1	ENSANIP00000021769	ENSANIP00000001993	ENSANIP00000021769	Leucine rich repeats and transmembrane domains 1.	annotation not available	0.568
LRTM1	ENSANIP00000022100	ENSANIP00000001993	ENSANIP00000022100	Leucine rich repeats and transmembrane domains 1.	annotation not available	0.595
LRTM1	KIAA0586	ENSANIP00000001993	ENSANIP00000001544	Leucine rich repeats and transmembrane domains 1.	KIAA0586.	0.512
LRTM1	MET	ENSANIP00000001993	ENSANIP00000009665	Leucine rich repeats and transmembrane domains 1.	MET proto-oncogene, receptor tyrosine kinase.	0.561
LRTM1	MST1R	ENSANIP00000001993	ENSANIP00000018919	Leucine rich repeats and transmembrane domains 1.	Macrophage stimulating 1 receptor.	0.561
LRTM1	NTNG1	ENSANIP00000001993	ENSANIP00000018355	Leucine rich repeats and transmembrane domains 1.	Netrin G1.	0.609
LRTM1	TMEM220	ENSANIP00000001993	ENSANIP00000016440	Leucine rich repeats and transmembrane domains 1.	Transmembrane protein 220.	0.504