STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHF2Pleckstrin homology and FYVE domain containing 2. (249 aa)    
Predicted Functional Partners:
MICU1
Mitochondrial calcium uptake 1.
   
 0.691
SMDT1
Single-pass membrane protein with aspartate rich tail 1.
     
 0.636
VPS28
VPS28 subunit of ESCRT-I.
    
 0.565
RAB7B
RAB7B, member RAS oncogene family.
     
 0.538
SNX29
Sorting nexin 29.
    
 
 0.538
ENSANIP00000000470
annotation not available
    
 0.535
ENSANIP00000016459
annotation not available
     
 0.535
PHB2
Prohibitin 2.
    
  0.532
MCU
Mitochondrial calcium uniporter.
     
 0.529
VPS36
Vacuolar protein sorting 36 homolog.
     
 0.529
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.