STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMPDL3BSphingomyelin phosphodiesterase acid like 3B. (462 aa)    
Predicted Functional Partners:
CERK
Ceramide kinase.
    
 0.907
SMPD2
Sphingomyelin phosphodiesterase 2.
     
 0.902
UGCG
UDP-glucose ceramide glucosyltransferase.
     
 0.873
ASAH1
N-acylsphingosine amidohydrolase 1.
   
 0.870
ACER2
Alkaline ceramidase 2.
     
 0.830
ACER1
Alkaline ceramidase 1.
     
 0.818
GALC
Galactosylceramidase.
     
 0.818
PLPP2
Phospholipid phosphatase 2.
     
 0.805
ENSANIP00000010974
annotation not available
     
 0.799
PLPP1
Phospholipid phosphatase 1.
     
 0.796
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
Server load: low (12%) [HD]