STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TYW5tRNA-yW synthesizing protein 5. (318 aa)    
Predicted Functional Partners:
ENSANIP00000000695
annotation not available
 
    
 0.929
TRMT12
tRNA methyltransferase 12 homolog.
 
    
 0.781
NPAS3
Neuronal PAS domain protein 3.
    
 0.649
ENSANIP00000006553
annotation not available
    
 0.649
EPAS1
Endothelial PAS domain protein 1.
    
 0.649
ENSANIP00000019489
annotation not available
    
 0.649
ENSANIP00000019502
annotation not available
    
 0.649
HIF1A
Hypoxia inducible factor 1 subunit alpha.
    
 0.649
LCMT1
Leucine carboxyl methyltransferase 1.
 
    
 0.586
ENSANIP00000005742
annotation not available
      
 0.570
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.