Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDX59DEAD-box helicase 59. (635 aa)    
Predicted Functional Partners:
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.886
GNL3
G protein nucleolar 3.
  
 0.788
WDR12
WD repeat domain 12.
   
 0.778
EIF4A3
Eukaryotic translation initiation factor 4A3.
  
0.771
BOP1
BOP1 ribosomal biogenesis factor.
   
 0.769
DDX24
DEAD-box helicase 24.
  
 
0.768
GTPBP4
GTP binding protein 4.
   
 
 0.750
DHX9
DExH-box helicase 9.
  
 0.750
NOP58
NOP58 ribonucleoprotein.
  
 
 0.747
EBNA1BP2
EBNA1 binding protein 2.
   
 0.734
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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