Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TPGS2Tubulin polyglutamylase complex subunit 2. (296 aa)    
Predicted Functional Partners:
LRRC49
Leucine rich repeat containing 49.
    
 0.993
ENSANIP00000023152
annotation not available
    
 0.993
TTLL1
Tubulin tyrosine ligase like 1.
   
 0.990
TPGS1
Tubulin polyglutamylase complex subunit 1.
    
 0.962
C11orf49
Chromosome 11 open reading frame 49.
    
   0.891
TTL
Tubulin tyrosine ligase.
   
  0.824
TRMT13
tRNA methyltransferase 13 homolog.
      
 0.647
ENSANIP00000022438
annotation not available
      
 0.636
C5orf22
Chromosome 5 open reading frame 22.
      
 0.607
SLC35E1
Solute carrier family 35 member E1.
      
 0.593
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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