STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHX2LIM homeobox 2. (201 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.858
ENSANIP00000007191
annotation not available
    
 0.853
SRF
Serum response factor.
    
 0.611
LMO1
LIM domain only 1.
   
 
0.600
LMO3
LIM domain only 3.
   
 
0.600
MFNG
MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.
    
 
 0.546
RFNG
RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.
    
 
 0.546
LFNG
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.
    
 
 0.546
GATA3
GATA binding protein 3.
    
 0.540
GATA2
GATA binding protein 2.
    
 0.540
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.