STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFAMTranscription factor A, mitochondrial. (217 aa)    
Predicted Functional Partners:
POLRMT
RNA polymerase mitochondrial.
    
 0.991
PPARGC1A
PPARG coactivator 1 alpha.
     
 0.923
TFB1M
Transcription factor B1, mitochondrial.
   
 0.820
GTF2H1
General transcription factor IIH subunit 1.
    
 0.811
GTF2H4
General transcription factor IIH subunit 4.
    
 0.798
ACTR8
Actin related protein 8.
    
 0.793
GTF2H3
General transcription factor IIH subunit 3.
    
 0.764
SRFBP1
Serum response factor binding protein 1.
   
 0.759
NDUFS4
NADH:ubiquinone oxidoreductase subunit S4.
    
 0.742
RUVBL1
RuvB like AAA ATPase 1.
    
 0.741
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.