STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A40Solute carrier family 25 member 40. (182 aa)    
Predicted Functional Partners:
TXNL1
Thioredoxin like 1.
   
    0.630
BBOX1
Gamma-butyrobetaine hydroxylase 1.
     
 0.525
ENSANIP00000006280
annotation not available
     
 0.460
ENSANIP00000013044
annotation not available
     
 0.460
ENSANIP00000013305
annotation not available
     
 0.460
ENSANIP00000014900
annotation not available
 
   
 0.460
ENSANIP00000022806
annotation not available
     
 0.460
TMLHE
Trimethyllysine hydroxylase, epsilon.
     
 0.453
ENSANIP00000015947
annotation not available
 
   
 0.450
RUNDC3B
RUN domain containing 3B.
      
 0.429
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.