ARID1B protein (Accipiter nisus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ARID1B

AT-rich interaction domain 1B. (1745 aa)

Predicted Functional Partners:

SMARCE1

0.986

MYSM1

0.983

SMARCB1

0.982

ENSANIP00000003197

0.973

SMARCD1

0.955

ENSANIP00000004254

0.955

SMARCD2

0.952

ENSANIP00000003187

0.944

ENSANIP00000013152

0.938

ENSANIP00000003960

0.927

Your Current Organism:

Accipiter nisus

NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID1B	ENSANIP00000003187	ENSANIP00000009853	ENSANIP00000003187	AT-rich interaction domain 1B.	annotation not available	0.944
ARID1B	ENSANIP00000003197	ENSANIP00000009853	ENSANIP00000003197	AT-rich interaction domain 1B.	annotation not available	0.973
ARID1B	ENSANIP00000003960	ENSANIP00000009853	ENSANIP00000003960	AT-rich interaction domain 1B.	annotation not available	0.927
ARID1B	ENSANIP00000004254	ENSANIP00000009853	ENSANIP00000004254	AT-rich interaction domain 1B.	annotation not available	0.955
ARID1B	ENSANIP00000013152	ENSANIP00000009853	ENSANIP00000013152	AT-rich interaction domain 1B.	annotation not available	0.938
ARID1B	MYSM1	ENSANIP00000009853	ENSANIP00000015219	AT-rich interaction domain 1B.	Myb like, SWIRM and MPN domains 1.	0.983
ARID1B	SMARCB1	ENSANIP00000009853	ENSANIP00000000044	AT-rich interaction domain 1B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.982
ARID1B	SMARCD1	ENSANIP00000009853	ENSANIP00000000992	AT-rich interaction domain 1B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.955
ARID1B	SMARCD2	ENSANIP00000009853	ENSANIP00000010876	AT-rich interaction domain 1B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.	0.952
ARID1B	SMARCE1	ENSANIP00000009853	ENSANIP00000014140	AT-rich interaction domain 1B.	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.986
ENSANIP00000003187	ARID1B	ENSANIP00000003187	ENSANIP00000009853	annotation not available	AT-rich interaction domain 1B.	0.944
ENSANIP00000003187	ENSANIP00000003197	ENSANIP00000003187	ENSANIP00000003197	annotation not available	annotation not available	0.900
ENSANIP00000003187	ENSANIP00000003960	ENSANIP00000003187	ENSANIP00000003960	annotation not available	annotation not available	0.925
ENSANIP00000003187	ENSANIP00000004254	ENSANIP00000003187	ENSANIP00000004254	annotation not available	annotation not available	0.928
ENSANIP00000003187	ENSANIP00000013152	ENSANIP00000003187	ENSANIP00000013152	annotation not available	annotation not available	0.991
ENSANIP00000003187	SMARCB1	ENSANIP00000003187	ENSANIP00000000044	annotation not available	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.	0.992
ENSANIP00000003187	SMARCD1	ENSANIP00000003187	ENSANIP00000000992	annotation not available	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.	0.928
ENSANIP00000003187	SMARCD2	ENSANIP00000003187	ENSANIP00000010876	annotation not available	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.	0.928
ENSANIP00000003187	SMARCE1	ENSANIP00000003187	ENSANIP00000014140	annotation not available	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.	0.991
ENSANIP00000003197	ARID1B	ENSANIP00000003197	ENSANIP00000009853	annotation not available	AT-rich interaction domain 1B.	0.973