STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN8Calpain 8. (627 aa)    
Predicted Functional Partners:
ENSANIP00000015873
annotation not available
   
0.865
ENSANIP00000005572
annotation not available
   
 0.855
ENSANIP00000016975
annotation not available
   
  0.759
BAK1
BCL2 antagonist/killer 1.
   
 0.717
ENSANIP00000004166
annotation not available
   
 0.632
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.623
CASP9
Caspase 9.
    
  0.610
ENSANIP00000016386
annotation not available
  
  
 
0.594
ENSANIP00000009748
annotation not available
  
  
 
0.592
PDCD6
Programmed cell death 6.
   
0.585
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.