STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBXN7UBX domain protein 7. (489 aa)    
Predicted Functional Partners:
CUL2
Cullin 2.
    
 0.999
VCP
Valosin containing protein.
   
 0.999
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 0.999
SPATA5L1
Spermatogenesis associated 5 like 1.
   
 0.999
ELOC
Elongin C.
   
 0.999
PSMB2
Proteasome 20S subunit beta 2.
    
  0.999
SPATA5
Spermatogenesis associated 5.
   
 0.999
KATNAL2
Katanin catalytic subunit A1 like 2.
   
 0.999
FAAP100
FA core complex associated protein 100.
    
 0.999
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
 0.999
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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