STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MIB1Mindbomb E3 ubiquitin protein ligase 1. (1006 aa)    
Predicted Functional Partners:
ENSANIP00000004059
annotation not available
   
  0.753
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.720
NHS
NHS actin remodeling regulator.
   
 0.690
JAG1
Jagged canonical Notch ligand 1.
   
 0.672
PCM1
Pericentriolar material 1.
    
 
 0.664
CYLD
CYLD lysine 63 deubiquitinase.
    
 0.660
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
  
0.656
CASP9
Caspase 9.
    
  0.653
DLL1
Delta like canonical Notch ligand 1.
   
 0.642
DLL4
Delta like canonical Notch ligand 4.
   
 0.642
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.