STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SWT1SWT1 RNA endoribonuclease homolog. (888 aa)    
Predicted Functional Partners:
TRMT1L
tRNA methyltransferase 1 like.
   
  
 0.583
SMG5
SMG5 nonsense mediated mRNA decay factor.
    
 
 0.558
IVNS1ABP
Influenza virus NS1A binding protein.
      
 0.556
PHTF1
Putative homeodomain transcription factor 1.
    
 
 0.552
AGTRAP
Angiotensin II receptor associated protein.
      
 0.522
PSMC3IP
PSMC3 interacting protein.
      
 0.518
GTF2H5
General transcription factor IIH subunit 5.
      
 0.516
DDX39B
DExD-box helicase 39B.
    
 
 0.516
COQ3
Coenzyme Q3, methyltransferase.
      
 0.513
MED12L
Mediator complex subunit 12L.
      
 0.444
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.