STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KATNA1Katanin catalytic subunit A1. (476 aa)    
Predicted Functional Partners:
KATNB1
Katanin regulatory subunit B1.
   
 0.996
KATNBL1
Katanin regulatory subunit B1 like 1.
   
 0.982
GPD2
Glycerol-3-phosphate dehydrogenase 2.
  
 0.917
PSMD6
Proteasome 26S subunit, non-ATPase 6.
   
 0.895
PSMD11
Proteasome 26S subunit, non-ATPase 11.
   
 0.887
PSMD12
Proteasome 26S subunit, non-ATPase 12.
   
 0.887
PSMD2
Proteasome 26S subunit, non-ATPase 2.
   
 0.885
PSMD13
Proteasome 26S subunit, non-ATPase 13.
   
 0.884
KATNAL1
Katanin catalytic subunit A1 like 1.
  
 
 
0.877
PSMD4
Proteasome 26S subunit, non-ATPase 4.
   
 0.874
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.