ENSANIP00000013817 protein (Accipiter nisus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSANIP00000013817

annotation not available (2159 aa)

Predicted Functional Partners:

EXOSC10

0.951

EXOSC1

0.943

EXOSC9

0.940

EXOSC8

0.939

EXOSC2

0.931

EXOSC3

0.928

C1D

0.927

ENSANIP00000023895

0.925

HBS1L

0.915

SUPV3L1

0.901

Your Current Organism:

Accipiter nisus

NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C1D	ENSANIP00000013817	ENSANIP00000017926	ENSANIP00000013817	C1D nuclear receptor corepressor.	annotation not available	0.927
C1D	ENSANIP00000023895	ENSANIP00000017926	ENSANIP00000023895	C1D nuclear receptor corepressor.	annotation not available	0.927
C1D	EXOSC1	ENSANIP00000017926	ENSANIP00000012875	C1D nuclear receptor corepressor.	Exosome component 1.	0.999
C1D	EXOSC10	ENSANIP00000017926	ENSANIP00000024166	C1D nuclear receptor corepressor.	Exosome component 10.	0.999
C1D	EXOSC2	ENSANIP00000017926	ENSANIP00000009694	C1D nuclear receptor corepressor.	Exosome component 2.	0.999
C1D	EXOSC3	ENSANIP00000017926	ENSANIP00000019886	C1D nuclear receptor corepressor.	Exosome component 3.	0.997
C1D	EXOSC8	ENSANIP00000017926	ENSANIP00000026899	C1D nuclear receptor corepressor.	Exosome component 8.	0.999
C1D	EXOSC9	ENSANIP00000017926	ENSANIP00000026109	C1D nuclear receptor corepressor.	Exosome component 9.	0.999
C1D	HBS1L	ENSANIP00000017926	ENSANIP00000013342	C1D nuclear receptor corepressor.	HBS1 like translational GTPase.	0.444
C1D	SUPV3L1	ENSANIP00000017926	ENSANIP00000026260	C1D nuclear receptor corepressor.	Suv3 like RNA helicase.	0.862
ENSANIP00000013817	C1D	ENSANIP00000013817	ENSANIP00000017926	annotation not available	C1D nuclear receptor corepressor.	0.927
ENSANIP00000013817	ENSANIP00000023895	ENSANIP00000013817	ENSANIP00000023895	annotation not available	annotation not available	0.925
ENSANIP00000013817	EXOSC1	ENSANIP00000013817	ENSANIP00000012875	annotation not available	Exosome component 1.	0.943
ENSANIP00000013817	EXOSC10	ENSANIP00000013817	ENSANIP00000024166	annotation not available	Exosome component 10.	0.951
ENSANIP00000013817	EXOSC2	ENSANIP00000013817	ENSANIP00000009694	annotation not available	Exosome component 2.	0.931
ENSANIP00000013817	EXOSC3	ENSANIP00000013817	ENSANIP00000019886	annotation not available	Exosome component 3.	0.928
ENSANIP00000013817	EXOSC8	ENSANIP00000013817	ENSANIP00000026899	annotation not available	Exosome component 8.	0.939
ENSANIP00000013817	EXOSC9	ENSANIP00000013817	ENSANIP00000026109	annotation not available	Exosome component 9.	0.940
ENSANIP00000013817	HBS1L	ENSANIP00000013817	ENSANIP00000013342	annotation not available	HBS1 like translational GTPase.	0.915
ENSANIP00000013817	SUPV3L1	ENSANIP00000013817	ENSANIP00000026260	annotation not available	Suv3 like RNA helicase.	0.901