STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SUPT6HSPT6 homolog, histone chaperone and transcription elongation factor. (934 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.999
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.991
SSRP1
Structure specific recognition protein 1.
   
 0.989
IWS1
Interacts with SUPT6H, CTD assembly factor 1.
   
 0.989
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
  
 0.987
RTF1
RTF1 homolog, Paf1/RNA polymerase II complex component.
   
 0.983
ENSANIP00000011482
annotation not available
   
 0.971
ENSANIP00000026918
annotation not available
   
 0.966
ENSANIP00000020341
annotation not available
   
 0.965
ENSANIP00000020680
annotation not available
   
 0.965
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.