STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB40CRAB40C, member RAS oncogene family. (285 aa)    
Predicted Functional Partners:
GDI2
GDP dissociation inhibitor 2.
   
 0.798
ENSANIP00000017560
annotation not available
    
 0.768
RABGGTB
Rab geranylgeranyltransferase subunit beta.
    
 0.758
ENSANIP00000021706
annotation not available
    
 0.742
RAB3IL1
RAB3A interacting protein like 1.
    
 0.742
ELOC
Elongin C.
    
 
 0.741
RILPL2
Rab interacting lysosomal protein like 2.
    
 
 0.704
CUL5
Cullin 5.
    
 
 0.683
ENSANIP00000002866
annotation not available
    
 0.679
SNU13
Small nuclear ribonucleoprotein 13.
   
 
  0.675
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.