ENSANIP00000019005 protein (Accipiter nisus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSANIP00000019005

annotation not available (94 aa)

Predicted Functional Partners:

MYO7A

0.842

ENSANIP00000014210

0.839

USH1G

0.812

WHRN

0.807

USH1C

0.795

ARID4A

0.790

ARID4B

0.790

ANKS4B

0.759

MYL12B

0.624

MYL9

0.624

Your Current Organism:

Accipiter nisus

NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANKS4B	ENSANIP00000014210	ENSANIP00000021297	ENSANIP00000014210	Ankyrin repeat and sterile alpha motif domain containing 4B.	annotation not available	0.759
ANKS4B	ENSANIP00000019005	ENSANIP00000021297	ENSANIP00000019005	Ankyrin repeat and sterile alpha motif domain containing 4B.	annotation not available	0.759
ANKS4B	MYO7A	ENSANIP00000021297	ENSANIP00000025375	Ankyrin repeat and sterile alpha motif domain containing 4B.	Myosin VIIA.	0.759
ANKS4B	USH1C	ENSANIP00000021297	ENSANIP00000020061	Ankyrin repeat and sterile alpha motif domain containing 4B.	USH1 protein network component harmonin.	0.987
ANKS4B	WHRN	ENSANIP00000021297	ENSANIP00000016069	Ankyrin repeat and sterile alpha motif domain containing 4B.	Whirlin.	0.582
ARID4A	ARID4B	ENSANIP00000003235	ENSANIP00000008702	AT-rich interaction domain 4A.	AT-rich interaction domain 4B.	0.906
ARID4A	ENSANIP00000014210	ENSANIP00000003235	ENSANIP00000014210	AT-rich interaction domain 4A.	annotation not available	0.790
ARID4A	ENSANIP00000019005	ENSANIP00000003235	ENSANIP00000019005	AT-rich interaction domain 4A.	annotation not available	0.790
ARID4A	MYO7A	ENSANIP00000003235	ENSANIP00000025375	AT-rich interaction domain 4A.	Myosin VIIA.	0.790
ARID4B	ARID4A	ENSANIP00000008702	ENSANIP00000003235	AT-rich interaction domain 4B.	AT-rich interaction domain 4A.	0.906
ARID4B	ENSANIP00000014210	ENSANIP00000008702	ENSANIP00000014210	AT-rich interaction domain 4B.	annotation not available	0.790
ARID4B	ENSANIP00000019005	ENSANIP00000008702	ENSANIP00000019005	AT-rich interaction domain 4B.	annotation not available	0.790
ARID4B	MYO7A	ENSANIP00000008702	ENSANIP00000025375	AT-rich interaction domain 4B.	Myosin VIIA.	0.790
ARID4B	USH1C	ENSANIP00000008702	ENSANIP00000020061	AT-rich interaction domain 4B.	USH1 protein network component harmonin.	0.597
ENSANIP00000014210	ANKS4B	ENSANIP00000014210	ENSANIP00000021297	annotation not available	Ankyrin repeat and sterile alpha motif domain containing 4B.	0.759
ENSANIP00000014210	ARID4A	ENSANIP00000014210	ENSANIP00000003235	annotation not available	AT-rich interaction domain 4A.	0.790
ENSANIP00000014210	ARID4B	ENSANIP00000014210	ENSANIP00000008702	annotation not available	AT-rich interaction domain 4B.	0.790
ENSANIP00000014210	ENSANIP00000019005	ENSANIP00000014210	ENSANIP00000019005	annotation not available	annotation not available	0.839
ENSANIP00000014210	MYL12B	ENSANIP00000014210	ENSANIP00000003986	annotation not available	Myosin light chain 12B.	0.624
ENSANIP00000014210	MYL9	ENSANIP00000014210	ENSANIP00000015414	annotation not available	Myosin light chain 9.	0.624