STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMG1EMG1 N1-specific pseudouridine methyltransferase. (231 aa)    
Predicted Functional Partners:
FCF1
FCF1 rRNA-processing protein.
   
 0.999
RCL1
RNA terminal phosphate cyclase like 1.
   
 0.999
ENSANIP00000001957
annotation not available
   
 0.999
ENSANIP00000003098
annotation not available
   
 0.999
RPS9
Ribosomal protein S9.
   
  0.999
RPS6
Ribosomal protein S6.
   
 0.999
UTP6
UTP6 small subunit processome component.
   
 0.999
DCAF13
DDB1 and CUL4 associated factor 13.
   
  0.999
BMS1
BMS1 ribosome biogenesis factor.
   
 0.999
PDCD11
Programmed cell death 11.
   
 0.999
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.