STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMO1Vitelline membrane outer layer 1 homolog. (180 aa)    
Predicted Functional Partners:
ARID4A
AT-rich interaction domain 4A.
    
 0.743
ARID4B
AT-rich interaction domain 4B.
    
 0.743
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.743
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.663
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.624
WDR90
WD repeat domain 90.
    
 0.590
ENSANIP00000005068
annotation not available
   
 0.577
ENSANIP00000026363
annotation not available
   
 0.577
MET
MET proto-oncogene, receptor tyrosine kinase.
    
  0.575
MST1R
Macrophage stimulating 1 receptor.
    
  0.575
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.