ENSANIP00000021800 protein (Accipiter nisus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSANIP00000021800

annotation not available (1855 aa)

Predicted Functional Partners:

ENSANIP00000009245

0.475

PER2

0.434

ARMH4

0.422

ENSANIP00000015449

0.403

ENSANIP00000011710

0.400

Your Current Organism:

Accipiter nisus

NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARMH4	ENSANIP00000021800	ENSANIP00000013107	ENSANIP00000021800	Armadillo like helical domain containing 4.	annotation not available	0.422
ENSANIP00000009245	ENSANIP00000021800	ENSANIP00000009245	ENSANIP00000021800	annotation not available	annotation not available	0.475
ENSANIP00000011710	ENSANIP00000015449	ENSANIP00000011710	ENSANIP00000015449	annotation not available	annotation not available	0.428
ENSANIP00000011710	ENSANIP00000021800	ENSANIP00000011710	ENSANIP00000021800	annotation not available	annotation not available	0.400
ENSANIP00000015449	ENSANIP00000011710	ENSANIP00000015449	ENSANIP00000011710	annotation not available	annotation not available	0.428
ENSANIP00000015449	ENSANIP00000021800	ENSANIP00000015449	ENSANIP00000021800	annotation not available	annotation not available	0.403
ENSANIP00000021800	ARMH4	ENSANIP00000021800	ENSANIP00000013107	annotation not available	Armadillo like helical domain containing 4.	0.422
ENSANIP00000021800	ENSANIP00000009245	ENSANIP00000021800	ENSANIP00000009245	annotation not available	annotation not available	0.475
ENSANIP00000021800	ENSANIP00000011710	ENSANIP00000021800	ENSANIP00000011710	annotation not available	annotation not available	0.400
ENSANIP00000021800	ENSANIP00000015449	ENSANIP00000021800	ENSANIP00000015449	annotation not available	annotation not available	0.403
ENSANIP00000021800	PER2	ENSANIP00000021800	ENSANIP00000008152	annotation not available	Period circadian regulator 2.	0.434
PER2	ENSANIP00000021800	ENSANIP00000008152	ENSANIP00000021800	Period circadian regulator 2.	annotation not available	0.434