KDM5B protein (Accipiter nisus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KDM5B

Lysine demethylase 5B. (1351 aa)

Predicted Functional Partners:

ATP5F1C

0.960

ATP5F1A

0.960

ENSANIP00000018057

0.960

ATP5F1D

0.960

ENSANIP00000011475

0.928

ENSANIP00000014857

0.928

ENSANIP00000004443

0.900

ATP5PB

0.883

KDM2A

0.860

BIRC6

0.860

Your Current Organism:

Accipiter nisus

NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk

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... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP5F1A	ATP5F1C	ENSANIP00000014364	ENSANIP00000004072	ATP synthase F1 subunit alpha.	ATP synthase F1 subunit gamma.	0.999
ATP5F1A	ATP5F1D	ENSANIP00000014364	ENSANIP00000026354	ATP synthase F1 subunit alpha.	ATP synthase F1 subunit delta.	0.999
ATP5F1A	ATP5PB	ENSANIP00000014364	ENSANIP00000022232	ATP synthase F1 subunit alpha.	ATP synthase peripheral stalk-membrane subunit b.	0.999
ATP5F1A	BIRC6	ENSANIP00000014364	ENSANIP00000002684	ATP synthase F1 subunit alpha.	Baculoviral IAP repeat containing 6.	0.627
ATP5F1A	ENSANIP00000004443	ENSANIP00000014364	ENSANIP00000004443	ATP synthase F1 subunit alpha.	annotation not available	0.960
ATP5F1A	ENSANIP00000011475	ENSANIP00000014364	ENSANIP00000011475	ATP synthase F1 subunit alpha.	annotation not available	0.999
ATP5F1A	ENSANIP00000014857	ENSANIP00000014364	ENSANIP00000014857	ATP synthase F1 subunit alpha.	annotation not available	0.999
ATP5F1A	ENSANIP00000018057	ENSANIP00000014364	ENSANIP00000018057	ATP synthase F1 subunit alpha.	annotation not available	0.999
ATP5F1A	KDM5B	ENSANIP00000014364	ENSANIP00000022148	ATP synthase F1 subunit alpha.	Lysine demethylase 5B.	0.960
ATP5F1C	ATP5F1A	ENSANIP00000004072	ENSANIP00000014364	ATP synthase F1 subunit gamma.	ATP synthase F1 subunit alpha.	0.999
ATP5F1C	ATP5F1D	ENSANIP00000004072	ENSANIP00000026354	ATP synthase F1 subunit gamma.	ATP synthase F1 subunit delta.	0.999
ATP5F1C	ATP5PB	ENSANIP00000004072	ENSANIP00000022232	ATP synthase F1 subunit gamma.	ATP synthase peripheral stalk-membrane subunit b.	0.999
ATP5F1C	ENSANIP00000004443	ENSANIP00000004072	ENSANIP00000004443	ATP synthase F1 subunit gamma.	annotation not available	0.960
ATP5F1C	ENSANIP00000011475	ENSANIP00000004072	ENSANIP00000011475	ATP synthase F1 subunit gamma.	annotation not available	0.999
ATP5F1C	ENSANIP00000014857	ENSANIP00000004072	ENSANIP00000014857	ATP synthase F1 subunit gamma.	annotation not available	0.999
ATP5F1C	ENSANIP00000018057	ENSANIP00000004072	ENSANIP00000018057	ATP synthase F1 subunit gamma.	annotation not available	0.999
ATP5F1C	KDM5B	ENSANIP00000004072	ENSANIP00000022148	ATP synthase F1 subunit gamma.	Lysine demethylase 5B.	0.960
ATP5F1D	ATP5F1A	ENSANIP00000026354	ENSANIP00000014364	ATP synthase F1 subunit delta.	ATP synthase F1 subunit alpha.	0.999
ATP5F1D	ATP5F1C	ENSANIP00000026354	ENSANIP00000004072	ATP synthase F1 subunit delta.	ATP synthase F1 subunit gamma.	0.999
ATP5F1D	ATP5PB	ENSANIP00000026354	ENSANIP00000022232	ATP synthase F1 subunit delta.	ATP synthase peripheral stalk-membrane subunit b.	0.999