STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHGBChromogranin B. (679 aa)    
Predicted Functional Partners:
SCG2
Secretogranin II.
   
  
 0.851
ENSANIP00000005052
annotation not available
    
  0.673
FAM20C
FAM20C golgi associated secretory pathway kinase.
    
  0.673
HLA-DRA
Major histocompatibility complex, class II, DR alpha.
   
  0.642
SCG3
Secretogranin III.
   
  
 0.638
RHBDL3
Rhomboid like 3.
    
 0.612
ENSANIP00000020218
annotation not available
    
 0.608
SCG5
Secretogranin V.
   
  
 0.601
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.594
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.593
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.