STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VIMVimentin. (459 aa)    
Predicted Functional Partners:
BANF1
Barrier to autointegration factor 1.
    
 0.773
ENSANIP00000018302
annotation not available
    
 
0.654
ENSANIP00000002146
annotation not available
    
 0.641
CASP3
Caspase 3.
    
 0.641
CASP7
Caspase 7.
    
 0.641
CASP8
Caspase 8.
    
 0.621
EEF1A1
Eukaryotic translation elongation factor 1 alpha 1.
     
 0.595
EEF1A2
Eukaryotic translation elongation factor 1 alpha 2.
     
 0.595
DES
Desmin.
  
  
 
0.586
ENSANIP00000019971
annotation not available
   
 
  0.582
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.