STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALKBH5alkB homolog 5, RNA demethylase. (382 aa)    
Predicted Functional Partners:
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
     
 0.857
AFDN
Afadin, adherens junction formation factor.
    
  0.621
METTL14
Methyltransferase like 14.
   
  
 0.610
WTAP
WT1 associated protein.
   
  
 0.597
ENSANIP00000012441
annotation not available
     
 0.588
YTHDF1
YTH N6-methyladenosine RNA binding protein 1.
      
 0.582
DDX46
DEAD-box helicase 46.
      
 0.580
ALKBH1
alkB homolog 1, histone H2A dioxygenase.
      
 0.579
YTHDC1
YTH domain containing 1.
      
 0.576
METTL3
Methyltransferase like 3.
   
  
 0.571
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.