STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMLHETrimethyllysine hydroxylase, epsilon. (421 aa)    
Predicted Functional Partners:
BBOX1
Gamma-butyrobetaine hydroxylase 1.
  
 
0.880
CRYL1
Crystallin lambda 1.
    
 0.859
ENSANIP00000003701
annotation not available
    
 0.853
ENSANIP00000012952
annotation not available
  
 0.813
ENSANIP00000012965
annotation not available
  
 0.813
BCAT2
Branched chain amino acid transaminase 2.
  
 
 0.788
BCAT1
Branched chain amino acid transaminase 1.
  
 
 0.788
SUOX
Sulfite oxidase.
    
  0.785
ENSANIP00000013879
annotation not available
  
 
 0.785
ALDH9A1
Aldehyde dehydrogenase 9 family member A1.
  
 0.748
Your Current Organism:
Accipiter nisus
NCBI taxonomy Id: 211598
Other names: A. nisus, Eurasian sparrowhawk
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.