STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APH_0062Conserved hypothetical protein; Identified by similarity to GB:AAL02641.1; match to protein family HMM PF06242. (188 aa)    
Predicted Functional Partners:
APH_0775
Conserved hypothetical protein; Identified by similarity to PIR:E97838; match to protein family HMM PF07031.
  
   
 0.766
APH_0903
Helicase, UvrD/Rep family; Identified by match to protein family HMM PF00580.
 
      0.757
APH_1218
DNA-binding protein; Identified by similarity to GB:AAN15209.1; match to protein family HMM PF01381.
  
     0.745
APH_0096
Tim44-like domain protein; Identified by match to protein family HMM PF04280.
  
     0.740
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.735
lysS
lysyl-tRNA synthetase; Identified by similarity to SP:O27585; match to protein family HMM PF01921; match to protein family HMM TIGR00467; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.715
holA
DNA polymerase III, delta subunit; Identified by similarity to GB:AAS14093.1; match to protein family HMM PF06144.
  
     0.707
APH_0923
Disulfide bond formation protein, DsbB family; Identified by match to protein family HMM PF02600.
  
     0.681
rho-1
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.
 
    0.661
APH_0783
Conserved domain protein.
      
 0.547
Your Current Organism:
Anaplasma phagocytophilum
NCBI taxonomy Id: 212042
Other names: A. phagocytophilum str. HZ, Anaplasma phagocytophilum HZ, Anaplasma phagocytophilum str. HZ
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.